PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 359aa MW: 38954 Da PI: 6.5062 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.6 | 8.1e-15 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl XP_019163813.1 39 KGLWSPEEDEKLMHYMLSNGQGCWSEVARNAGLQRCGKSCRLRWINYL 86 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.7e-17 | 92 | 136 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_019163813.1 92 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNST 136 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MRKPEFSSGK NGANVGNSNM NSSSDGGGGG NNVGAKLRKG LWSPEEDEKL MHYMLSNGQG 60 CWSEVARNAG LQRCGKSCRL RWINYLRPDL KRGAFSPQEE ELIIHLHSLL GNRWSQIAAR 120 LPGRTDNEIK NFWNSTLKKR MKNSSSSPST TSPNTSDNNS SSLEPCRDNN IMGALISSSS 180 MPQDHHHHHN NGGAAALMSS MYMHDPSSSS SSFSSSLPLT TAADPLPMLG HSFSAAAASF 240 METGHALGGG GAYYGDHHGI FGGNIGAEEG PPPNHLFMVP PLESVNNVEC HVVKSEGFVN 300 NNNNINTNIN NHFMNNNNVK VENVGGGFGS YWDNGGEWDL EELMKDVPNS FPFLDFQLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 1e-58 | MYB family protein |