PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163697.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | Trihelix | ||||||||
Protein Properties | Length: 429aa MW: 48513.5 Da PI: 4.9003 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 70.4 | 3.4e-22 | 116 | 212 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ v++Li+++ ++++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkrykk++++ +++ ++ ++++ ++ d XP_019163697.1 116 KWTDSIVKLLIQVVAYVGDDVCLEGpeglkrksgciQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKKLNDILGRGtSCAVVENPALMD 210 7**************999998843224556677889**********************************************5689999888888 PP trihelix 84 ql 85 ++ XP_019163697.1 211 SM 212 77 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MSSSGLGNGF LSGYSGGFLG MNRPQQPQLN GNDVGNNRIQ SSMDLKMELE NGKRIELLES 60 KGPAQKGFTM TFGKDKRVFC NNDMSDEDEP SLAEDGNGEN EDEAPGKKGS QWQRMKWTDS 120 IVKLLIQVVA YVGDDVCLEG PEGLKRKSGC IQKKGKWKTV SKIMISKGCH VSPQQCEDKF 180 NDLNKRYKKL NDILGRGTSC AVVENPALMD SMPQLSAKAK DTVKKILCSK HLFYREMCAY 240 HNGQKIPDCS DLELQIHSSS VATHCSKDNN GCPGDEAEEN DDSVDDESGD EENNTASGDA 300 VKTGTCYERR ENEQSVDNDC FGVEIDEFFQ DPTKSQWERK AWIKKRMLQL EEERVGIEEE 360 AVELEKRRFK WQRFCSEKDR ELEIERLENE RLILENKRMV LQLKLKDHEL DLPTPCVPFK 420 SGPLSLDRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 2e-66 | Trihelix family protein |