PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26544 Da PI: 6.6007 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +g+WvAeI+ s ++ r +lg+f+taeeAa a+++a+ l+g XP_019163670.1 24 KFVGVRQRP-SGKWVAEIKNTS---QKIRMWLGTFDTAEEAAMAYDEAACLLRG 73 799******.7******99932...36**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MELHFQNHQK EGGVREAAAN KRRKFVGVRQ RPSGKWVAEI KNTSQKIRMW LGTFDTAEEA 60 AMAYDEAACL LRGSNTRTNF INHAPPNPAL SLKIRNLLTQ KKKNLKKTPM ISPSQTPPAS 120 DDSKSFVSVT APDVPVLDNA YKPGFSFSAG GLGHDHSSLM VDFDRFLLAQ SDEVLKGNHE 180 DEISEFEHMK VEREISASMY AMNGVNEYWE NVHEYDCSSD HAFLDLPMLC QMFCST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-42 | ERF family protein |