PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019163335.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

E2F/DP

Protein Properties

Length: 431aa MW: 47948.8 Da PI: 4.5913

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019163335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.2	2.5e-27	109	174	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_019163335.1 109 RYDSSLGLLTKKFINLIRHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 174 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MQQDLKPQQL PFMVVKPPSG DFRRFSADHP RPSPAQEPDD IIVNTPVPID QDPSFGCAVN 60 SPMQTPASGK AKKAQRVPRT SKSRRYVSQN AADDGSPSGN NVTPVGSCRY DSSLGLLTKK 120 FINLIRHAED GILDLNKAAD TLEVQKRRIY DITNVLEGIG LIEKKLKNRI QWKGLDVSRT 180 RDFDGVSNLQ AEVEKLMLEE RRIDEEIREM QDRLRDLSED ENNKGWLFVT EEDIKGLPCF 240 QNGTLLAIKA PHGTTLEVPD PDEAVDYPQR RYRVILRSTM GPIDVYLVSQ FEKKLEEMNA 300 VDVAPSIHST SGANENATAM VETEESRGNE VLQEKETERV SSNVGTSQDF TSGIMKIVPD 360 VDNEADYWLL SDVDVSITDM WTTEPKVNWS ALNLVHEDYT MANISTPRAQ TPPVAAETPS 420 AANTAVSLPA V

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MQQDLKPQQL PFMVVKPPSG DFRRFSADHP RPSPAQEPDD IIVNTPVPID QDPSFGCAVN  60
SPMQTPASGK AKKAQRVPRT SKSRRYVSQN AADDGSPSGN NVTPVGSCRY DSSLGLLTKK  120
FINLIRHAED GILDLNKAAD TLEVQKRRIY DITNVLEGIG LIEKKLKNRI QWKGLDVSRT  180
RDFDGVSNLQ AEVEKLMLEE RRIDEEIREM QDRLRDLSED ENNKGWLFVT EEDIKGLPCF  240
QNGTLLAIKA PHGTTLEVPD PDEAVDYPQR RYRVILRSTM GPIDVYLVSQ FEKKLEEMNA  300
VDVAPSIHST SGANENATAM VETEESRGNE VLQEKETERV SSNVGTSQDF TSGIMKIVPD  360
VDNEADYWLL SDVDVSITDM WTTEPKVNWS ALNLVHEDYT MANISTPRAQ TPPVAAETPS  420
AANTAVSLPA V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-123	E2F/DP family protein