PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019163296.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 481aa MW: 52737 Da PI: 7.4116

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019163296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	8e-11	174	215	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ L++ ++L XP_019163296.1 174 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLSQLEQEL 215 5889*************************8665555555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MAASQRVGET GVSGTSSQHH HNMPYELLRG LNNPTTTPSF MYHSTSNSKE GPAAFDFGEL 60 EEAIVLQGVN NDEAKASLYA AATLEMFPSW PTRSPLHTPR GSSRSGGEES GDSGRAEGPD 120 SPISTRPSSH LSLPSTQNHQ PQIMATTTSA ASKQPTTHDK RRGAGSTSDR VLDAKTLRRL 180 AQNREAARKS RLRKKAYVQQ LETSRIRLSQ LEQELHSARS QGVFLGGGGA VGAGTSSGGA 240 IFDMEYARWL DDDHRHISEL RTALQAHLSD GELRVVVDGY IGHYDEIFRL KGEAAKSDVF 300 HLITGMWTTP AERCFLWMGG FRPSELIKML TGKLDPLTEQ QVVGIYGLQH SSQQAEEALT 360 QGLDQLQQSL VETIAVGSAA ADGGVHHMAM AIGKLANLEG FVRQADNLRQ QTLHQLHRIL 420 TVRQAARCFL MIGEYYNRLR ALSSLWASRP RETMIAGDDS SCQTTTHLQM VQFSQSHFSN 480 F

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MAASQRVGET GVSGTSSQHH HNMPYELLRG LNNPTTTPSF MYHSTSNSKE GPAAFDFGEL  60
EEAIVLQGVN NDEAKASLYA AATLEMFPSW PTRSPLHTPR GSSRSGGEES GDSGRAEGPD  120
SPISTRPSSH LSLPSTQNHQ PQIMATTTSA ASKQPTTHDK RRGAGSTSDR VLDAKTLRRL  180
AQNREAARKS RLRKKAYVQQ LETSRIRLSQ LEQELHSARS QGVFLGGGGA VGAGTSSGGA  240
IFDMEYARWL DDDHRHISEL RTALQAHLSD GELRVVVDGY IGHYDEIFRL KGEAAKSDVF  300
HLITGMWTTP AERCFLWMGG FRPSELIKML TGKLDPLTEQ QVVGIYGLQH SSQQAEEALT  360
QGLDQLQQSL VETIAVGSAA ADGGVHHMAM AIGKLANLEG FVRQADNLRQ QTLHQLHRIL  420
TVRQAARCFL MIGEYYNRLR ALSSLWASRP RETMIAGDDS SCQTTTHLQM VQFSQSHFSN  480
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein