PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162699.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HB-other

Protein Properties

Length: 1649aa MW: 185483 Da PI: 5.2121

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.3e-19	27	82	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ ql++Le++++++ yp++++r++L++klgLt+rq ++WF+ rR k+kk XP_019162699.1 27 PKRQMKTPFQLQTLEKVYAMETYPTEATRADLSDKLGLTDRQLQMWFCHRRLKDKK 82 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1649 aa Download sequence
MEGGSEGEES NKNANHSPSD GGQHKKPKRQ MKTPFQLQTL EKVYAMETYP TEATRADLSD 60 KLGLTDRQLQ MWFCHRRLKD KKEAAGGAAL KPRVGHADGI GGKRSLMESP RDEEMAEPGS 120 DHGSGSGSGS RSSQFDNGDD MLTGPPKYYE PPRVVKQHQI IACIEVQLGH PLREDGPVLG 180 VEFDELPPGA FEASIAETEH RDRYQHSYDR MSFGSREAKQ INTLPKTSCE PAVHKARSDR 240 YGQVGPSYIY DSPANGPSAK ALSVTESNGN LSREYVAEGH VSSANLLFQQ SRQGQFSSPT 300 GDGEFIACND GTSQMERKRK TDEARTEREV QAHEKRIRKE LEKQDLLRKK MEEQMKKEME 360 RQDRERRKEE KRMMREQQRM EERFQREERR EMERREKFMQ KELIKAERKR LKEELRAERE 420 AAKQKAAMER AAARKFAKES MELIEDERLE LMELAASSKG LPSILSLDYN TLQNLELFRE 480 FLCDFPPKSV QMKKPFPIQP WIDSDDNVGN LLMAWRFCLN FADVLDLWPF TLDEFVQGFH 540 DYDSRLLSEI HIVLLKLIIK DIEDVARTPS GGPGTNQYNA VNPEGGHPKI VQGAYLWGFD 600 ICNWKKHLNL LTWPEVLRQL GLSAGFGPQL KKKNKEGANF NDSDETKGCE DIVSTLRSGS 660 AAENAVAVMQ EKGHMLQRKS RHRLAPGTVK FAAYHVLALE GEKGLNVIEL AEKIQKSGLR 720 DLRTSKTPEA SISVALSRDP VLFERIAPST YCVRPAFRKD PADAEAIISA AREKIQRYLN 780 GFLAGQNGDD EERDDDSECD ATDVPEVDDL GTPSAANKPS YQQSEVEACS LNEKYNLPEE 840 VTLPNGFDTV GIRERNPGQE GEEIDESKSG EPWVQGLTEG EYSDLCVEER LNALTALISL 900 ANEGNSIRAI LEERLDAANA LKKQMWAEAQ LDKRRTKDEN LNKLPDSSFN VVAKGSQSPL 960 AIPDYKNHEA STTAEVNETS TGNTSTKRHL EIFSAEKSSV AQELTTNLPS GHTAERSRMQ 1020 LKSFIGHKAE EMYVYRSLPL GQDRRRNRYW VFVASGSSHD PGSGRIFVES PGGCWKVIDT 1080 EEVFDALLTS LETRGIRESH LHMMLQKIEI PFRECVRSTI SNADSMVQHR NTTGHEASIS 1140 PACYASADSP NSMVCNINSE GCEYSSSFKI ELGRNEMEKG SALRKYQDFQ IWMWKEFFGS 1200 SNLCSVEFRK KRCSPLLGIC DACLDSYLFE EGLCPSCHRA FGKVDGIITF LEPSINVDKI 1260 KVDSKDLIVS SPPRIRMIKA LLSMLEVSIP SEALQPSWTE ECRRIWGLRL HNSSSTEDLL 1320 QNLTQLEGFL KRDYLSSSFE TTKELLGCST SRFTACHSAF PGSVPELPWI PQTTAAVGLR 1380 LLELDAAVSY DPDQNTNELK VSFIKPALGY ASTKNLQKVE PMMLDQNGQL KEENWNYSGR 1440 QVVRSKGIGR PRGRWPKETA ASVSGSSRPS ARHSETLTQV LIQQGEAQGH KHRRGRRTLR 1500 RRRTEKLVID EIQPDYLGDE ANLERYSQSP RSNGHEREAI DMNIGRMQVE NDDNSSSGES 1560 DDSAQENPYE FGKRQIHFKV SNRGDDMMEI PNDDVDDSSD DNQCGYPDYN QNLGGGDVDM 1620 EDGEDELDGN GDSEDDQGSD SEVHGDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1649 aa Download sequence

MEGGSEGEES NKNANHSPSD GGQHKKPKRQ MKTPFQLQTL EKVYAMETYP TEATRADLSD  60
KLGLTDRQLQ MWFCHRRLKD KKEAAGGAAL KPRVGHADGI GGKRSLMESP RDEEMAEPGS  120
DHGSGSGSGS RSSQFDNGDD MLTGPPKYYE PPRVVKQHQI IACIEVQLGH PLREDGPVLG  180
VEFDELPPGA FEASIAETEH RDRYQHSYDR MSFGSREAKQ INTLPKTSCE PAVHKARSDR  240
YGQVGPSYIY DSPANGPSAK ALSVTESNGN LSREYVAEGH VSSANLLFQQ SRQGQFSSPT  300
GDGEFIACND GTSQMERKRK TDEARTEREV QAHEKRIRKE LEKQDLLRKK MEEQMKKEME  360
RQDRERRKEE KRMMREQQRM EERFQREERR EMERREKFMQ KELIKAERKR LKEELRAERE  420
AAKQKAAMER AAARKFAKES MELIEDERLE LMELAASSKG LPSILSLDYN TLQNLELFRE  480
FLCDFPPKSV QMKKPFPIQP WIDSDDNVGN LLMAWRFCLN FADVLDLWPF TLDEFVQGFH  540
DYDSRLLSEI HIVLLKLIIK DIEDVARTPS GGPGTNQYNA VNPEGGHPKI VQGAYLWGFD  600
ICNWKKHLNL LTWPEVLRQL GLSAGFGPQL KKKNKEGANF NDSDETKGCE DIVSTLRSGS  660
AAENAVAVMQ EKGHMLQRKS RHRLAPGTVK FAAYHVLALE GEKGLNVIEL AEKIQKSGLR  720
DLRTSKTPEA SISVALSRDP VLFERIAPST YCVRPAFRKD PADAEAIISA AREKIQRYLN  780
GFLAGQNGDD EERDDDSECD ATDVPEVDDL GTPSAANKPS YQQSEVEACS LNEKYNLPEE  840
VTLPNGFDTV GIRERNPGQE GEEIDESKSG EPWVQGLTEG EYSDLCVEER LNALTALISL  900
ANEGNSIRAI LEERLDAANA LKKQMWAEAQ LDKRRTKDEN LNKLPDSSFN VVAKGSQSPL  960
AIPDYKNHEA STTAEVNETS TGNTSTKRHL EIFSAEKSSV AQELTTNLPS GHTAERSRMQ  1020
LKSFIGHKAE EMYVYRSLPL GQDRRRNRYW VFVASGSSHD PGSGRIFVES PGGCWKVIDT  1080
EEVFDALLTS LETRGIRESH LHMMLQKIEI PFRECVRSTI SNADSMVQHR NTTGHEASIS  1140
PACYASADSP NSMVCNINSE GCEYSSSFKI ELGRNEMEKG SALRKYQDFQ IWMWKEFFGS  1200
SNLCSVEFRK KRCSPLLGIC DACLDSYLFE EGLCPSCHRA FGKVDGIITF LEPSINVDKI  1260
KVDSKDLIVS SPPRIRMIKA LLSMLEVSIP SEALQPSWTE ECRRIWGLRL HNSSSTEDLL  1320
QNLTQLEGFL KRDYLSSSFE TTKELLGCST SRFTACHSAF PGSVPELPWI PQTTAAVGLR  1380
LLELDAAVSY DPDQNTNELK VSFIKPALGY ASTKNLQKVE PMMLDQNGQL KEENWNYSGR  1440
QVVRSKGIGR PRGRWPKETA ASVSGSSRPS ARHSETLTQV LIQQGEAQGH KHRRGRRTLR  1500
RRRTEKLVID EIQPDYLGDE ANLERYSQSP RSNGHEREAI DMNIGRMQVE NDDNSSSGES  1560
DDSAQENPYE FGKRQIHFKV SNRGDDMMEI PNDDVDDSSD DNQCGYPDYN QNLGGGDVDM  1620
EDGEDELDGN GDSEDDQGSD SEVHGDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	83	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein