PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162635.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 357aa MW: 39842.1 Da PI: 9.8807

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.6e-32	173	226	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_019162635.1 173 PRMRWTTTLHARFVNAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 226 9****************************************************7 PP
2	Myb_DNA-binding	49.1	1.3e-15	174	225	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_019162635.1 174 RMRWTTTLHARFVNAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 225 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MELFPAQPDL SLRISPPNAK PSSSPWTTSK AQEHHHHGDV MDLSFWKRAL ETRNSMAKTE 60 SAINAASSSS SSFELSLSNP WSNTNRSSEH NGNINGGNNF AQFQFHQQQV GLGSELGFLR 120 PIRGIPVYCQ NPPSSPSSSS SQSHHHHRHH QALMRSRFLP AARFPARRSM RAPRMRWTTT 180 LHARFVNAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DKAAVAASSG 240 QSEIFDNGSS GDTSEDVQTS RKSELSVQKG TQNMHNQDKD YHGLWCNFSS SRESWLHGNP 300 SDCRGSTPFP TEKDKDPRLF GYERMSAEMN SSNITTTMET RSNKPNLEFT LGRPSGQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MELFPAQPDL SLRISPPNAK PSSSPWTTSK AQEHHHHGDV MDLSFWKRAL ETRNSMAKTE  60
SAINAASSSS SSFELSLSNP WSNTNRSSEH NGNINGGNNF AQFQFHQQQV GLGSELGFLR  120
PIRGIPVYCQ NPPSSPSSSS SQSHHHHRHH QALMRSRFLP AARFPARRSM RAPRMRWTTT  180
LHARFVNAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT DKAAVAASSG  240
QSEIFDNGSS GDTSEDVQTS RKSELSVQKG TQNMHNQDKD YHGLWCNFSS SRESWLHGNP  300
SDCRGSTPFP TEKDKDPRLF GYERMSAEMN SSNITTTMET RSNKPNLEFT LGRPSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-43	G2-like family protein