PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26897 Da PI: 4.9634 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2.1e-20 | 79 | 129 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd k +r++lg+f+taeeAa a+++a+++++g XP_019162287.1 79 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAAMAYDKAALRIRG 129 7********.**********3...2234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGSVEREQES ASSDAILENV WANFIAKNES KESQYEYENW DGILHRLPSL EELQTSINGG 60 PKSSPERVKV EKEVVRRRHY RGVRRRPWGK YAAEIRDSSR KGARVWLGTF DTAEEAAMAY 120 DKAALRIRGP KAYLNFPLQS TVDDARGTCC NQNELSSANC SFIGSCFGYG EITCDSRKRV 180 SREWDIFEDS SCMITQPAQK MQPQTRLEET LETSFTDVVE FQDLGSDYLE HLLLIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 5e-17 | ERF family protein |