PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162255.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 163aa    MW: 18715.3 Da    PI: 10.0672
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.86e-1664116155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR+riN  ++ Lr+llP  +   +++Kls  +++ ++v+YI +Lq
  XP_019162255.1  64 KKLSHNASERDRRKRINALYSSLRSLLPDsD---QARKLSIPATVSRVVKYIPELQ 116
                     6789*************************66...********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MLAFSSPLSF PIFPSPLWPL EESIRHQEFN SDMYRDDMTF LDPHGSSESF KFSESNGGTA  60
MEIKKLSHNA SERDRRKRIN ALYSSLRSLL PDSDQARKLS IPATVSRVVK YIPELQKQVE  120
RLQQKKEELG SRICRQESSL AEFNMRTRIG SQRPIPAVSV NQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04150.15e-31bHLH family protein