PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 778aa MW: 88486.3 Da PI: 7.1482 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.7 | 1.1e-19 | 71 | 157 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA++vGFsvrk +++ + ++++ ++ f+Csk g++ + + + ++ tr gC a+++ +dg w vtk ++ HnHel+ XP_019162209.1 71 LYNNYAYRVGFSVRKGNQRCKVYSKTVQMKMFMCSKAGFKVKANAG--VRAYSKIDTRSGCGACVQFDVGEDGLWTVTKHVKVHNHELC 157 7***************************************998877..888899**********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 778 aa Download sequence |
MDDAVDQRDE ALDQRDEAGD ELHTVPVSED VVVDSPSSDP IELDIDGSSS NPVDEDLVGV 60 VVSNGVEAYE LYNNYAYRVG FSVRKGNQRC KVYSKTVQMK MFMCSKAGFK VKANAGVRAY 120 SKIDTRSGCG ACVQFDVGED GLWTVTKHVK VHNHELCAVD KSHLLRSHRN VGDNQLLYLK 180 DLKKSGVAMV DGIRFLKHQA GGSPLVGFTN RDAYNSIASD TSKRLDGTDS NSLIEIFRKR 240 QSTESDFFFD FEVECDSRLC SFFWRDGRMR QDYELFGDLL VHDTTYRTNK YDMICGPFVG 300 MNHHCMNVMF GCGFLMNERI ESFVWLFRAF LRSMNGKCPQ TIMTDQCASM AAAICQVFPT 360 SRHRLCIWHI GENSKKHIKA LRNNKDFLDM FNCVLKYTET EAEFEFYWTR LVTDYKCHKN 420 SWIQKLYDCR EKWCPAFNKD YFSGGILSSQ RSETTNHSIS RRLSKTAGLC DFYSSFVSVT 480 SEWRSKENGE DFRCTQGVPN MMMEHVKLLL HAREVYTIEI YFLFEEQFMK GNACHQEMVL 540 NEGCQFKYHV WRPDIDIIRH EVSFKLSTLD ISCSCKLISE LGILCCHCLR ILHIHCVSSI 600 PNKYIMKRWT KKVADGRDVN TGSMFCRAGV PPSIWVVEIC RKFQRLISSS QDNSVTRQFC 660 DEAVEEAKKK VEAEIGYVQI EECGVSSSSG VIQNPSNRRS KGERNVRRSS VIEKKYSAAR 720 GRRSGANKVT SSTKGVVQSL VLESLSEIAG DGYLVHPSSG SSEFCQYSND VDDNAVVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-80 | FAR1 family protein |