PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 268aa MW: 30346.2 Da PI: 8.6629 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.4 | 1.5e-49 | 8 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv+++ +++++i+e+diyk++Pw+Lp + + +ekew+fFs+rd+ky++g+r+nra++sgyWkatg+dk++ls+ XP_019162164.1 8 LPPGFRFHPTDEELITCYLMKKVASSVDPTASMIAEADIYKFNPWELPGRGYFGEKEWFFFSPRDRKYPNGHRPNRAAASGYWKATGTDKPILSA 102 79*************************999999***************8778899**************************************98 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ g+kk+Lvfy+gr +kg ktdW+m eyrl XP_019162164.1 103 taSSRCLGVKKSLVFYRGRPQKGIKTDWTMWEYRL 137 767777***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MQDMTQSLPP GFRFHPTDEE LITCYLMKKV ASSVDPTASM IAEADIYKFN PWELPGRGYF 60 GEKEWFFFSP RDRKYPNGHR PNRAAASGYW KATGTDKPIL SATASSRCLG VKKSLVFYRG 120 RPQKGIKTDW TMWEYRLLNN GHQPFRQKGS MRLDDWVLCR VRNKSNNVAE GRFGNGKEDI 180 TEKINPSYYD HHCYAGGSEV LDGVEYFGHF QTGSSSNPLG MYGSQANIMG GSVKEALENI 240 KRVLLFEPCM NGHPQILNQD GSEFNPTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-69 | NAC family protein |