PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019162159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 635aa MW: 71982.3 Da PI: 9.1711 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.8 | 2.8e-21 | 30 | 117 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Yn YA++vGFsvrk +++++ +++i +++f C k g++++ ++ + ++ rtgC a ++ dg w vtk +eHnHel++ XP_019162159.1 30 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKQKPNSG--VKLYSKIDMRTGCGAFVQFDVGGDGMWTVTKHLKEHNHELCS 117 7****************************************99887..888999**********************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 635 aa Download sequence |
MVIICKLNVV IVDEDLVGVV VRNVDEAFEL YNGYAYRVGF SVRKGQQRYK ASTKSIQMKR 60 FFCAKAGYKQ KPNSGVKLYS KIDMRTGCGA FVQFDVGGDG MWTVTKHLKE HNHELCSFGK 120 SHLLRSHRRV GNNQLEYLKD MKSSGVALAD GMRFLKHQSG GSPLVGFTNR DAYNSMAFVS 180 LKCLDGSDSN SLVEIFRRRQ SNEVDFFFDF EVDLDGRLAF LRSMDGKCPQ TIMTDQCSAM 240 AAGISMVFPT SRHRLCIWHI GENSKKHIKA LRNHKDFLDM FNCVLKYTET KAEFEVYWTR 300 MVTKYNCHKN TWLEKLYDCR EKWCPAFNKD YFSGGILSSQ RSESTNHAIS RRLSKTAGLC 360 DFYSSFVSVI SEWRSKENGE DFRCSQGVPA MMLDHVKLLS HAREYHVWRP DIDIIRHEVT 420 FKAINLDICC SCKLFSELGI LCCHCLRILH VHCVSSIPDK YILKRWTKKA VERTNVDIAS 480 VFYNGGVPSS IWAVEISRKF QRLIVSSQDN SVARQLCDEA VENARKNIEA EIGDVNTEEG 540 AVSSSSGIVQ DPSSRRRKGV RNKRSSSVIE KKYNAARGRK SAANKLASIT KGSVQSLVLE 600 NISEIARDGY LVHPSTGGSQ FVHFNKNVDH DVAID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G15090.1 | 8e-37 | FAR1 family protein |