PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019161367.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 274aa MW: 29490.9 Da PI: 9.1489

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019161367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.5e-38	65	125	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++al+cprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg r+n+k+s XP_019161367.1 65 PDAALNCPRCESTNTKFCYFNNYSLTQPRHFCKSCRRYWTRGGALRNVPVGGGFRRNNKRS 125 57899***************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MVFGSIPAYL DPANWQQVQP NHNTGVCAPP SSQLCSSAPL PPPHVGSIRP GSMAERARQA 60 NIPAPDAALN CPRCESTNTK FCYFNNYSLT QPRHFCKSCR RYWTRGGALR NVPVGGGFRR 120 NNKRSNTTKP TSSNNNTTTT SSSSPASTSL LGFLPQIPPP PPNFNLLGGQ LSDTHFHGGE 180 GGGSILSGSA AIDQWRLQQA SQRQLSFLGG LNPSSYGLYP FQDGSGTMLG QMQEESRLLS 240 PWSQIFMIPA SEQWNCVGGS WSNVSTNLNS SANL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-46	Dof family protein