PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019160934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 584aa MW: 65086.7 Da PI: 5.9708 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.4 | 2.7e-09 | 95 | 156 | 15 | 74 |
FAR1 15 rkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdg 74 +k++s +++r+g ++++ vC+++g++++ ++ t+ +rr+r+++r+gCkak+++k++++g XP_019160934.1 95 TKQHSIRKDRDGVAVEKHIVCNRQGYKQRVSRVakTTLARRRRVTNRVGCKAKVVIKRKSNG 156 577888899*****************9987765558899*******************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 584 aa Download sequence |
MWCAADVLQF GGVCGEGSGG VYDNSTDVCG EGNGGVCDEG NPTDVGVECN GDGCDEGNVT 60 DVGVAGSGVG CDEDYLADVG VQGSVCVLET SPGLTKQHSI RKDRDGVAVE KHIVCNRQGY 120 KQRVSRVAKT TLARRRRVTN RVGCKAKVVI KRKSNGFLDA GHQMFIASCV RANIGSVQSY 180 RLFKEIVGEY SSVGATGVDF KNFKRDQMAY ILNDDAQLFI DTLFKRRELC EAFDFEYDVD 240 EGDQLSRVFW VDAVSRKNFA LFGDVVSFDA AYRTNRYKLV FVPFTGIDNH KRSITFGAGL 300 LMREDVDSYV WLLEKFKKTM CHDPICGVTD QDPALKVAVA RVFGTSKHRF CMWHIMCKVG 360 EKVGPILSKD EVFRRKLNGI VWNKSLDSKS FEEAWSCIME EYGLGDNGWF HYLFESRRYW 420 ASPYFHDEFM SGLTPLALEK HAMDVYTISV FYDVQVEICA ACYSCQVVSL CDCDVHVSYG 480 IKDGAQRAWY VVSRWTKGAC LKPIFHINDT IVDQSSKVEN VRIFTNLLWS DIYACVGLAD 540 GNIERLSQLR RVICEQRQLY LQEGSEDGSG VVAGGGSRTS TVEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-53 | FAR1 family protein |