PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160496.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 199aa    MW: 22003 Da    PI: 9.2793
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.38.2e-393796261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    ke+ l+cprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rkn+k+
  XP_019160496.1 37 KEQVLNCPRCNSGNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNIPVGGGSRKNNKK 96
                    68999****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDNAQWPQEL VMRPMEEIVP IIGNNKRGER KGIRFQKEQV LNCPRCNSGN TKFCYYNNYS  60
LSQPRYFCKT CRRYWTAGGS LRNIPVGGGS RKNNKKPSSS SIKKVADLVP PVPISADQNS  120
SKIHGHHQDL NLGGQLSAME LLTGFTSIGL STDPNLIYSP GMISLPQSKQ CLKICLDGAD  180
EDRDWNNGVL RGGGGGESW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.11e-39Dof family protein