PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019160089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 35730 Da PI: 6.4224 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59 | 1.1e-18 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W++ a++ g++Rt+k+c++rw++yl XP_019160089.1 29 RGPWTLEEDTLLIKYIAAHGEGRWNALAKCAGLRRTGKSCRLRWLNYL 76 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 82 | 125 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_019160089.1 82 RGNLTPQEQILILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 125 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MMVSKSGAIQ SLSNNNSCNE EERFGELRRG PWTLEEDTLL IKYIAAHGEG RWNALAKCAG 60 LRRTGKSCRL RWLNYLKPDI KRGNLTPQEQ ILILELHSKW GNRWSKIAQH LPGRTDNEIK 120 NYWRTRVQKQ ARQLKIDSNS KKFIEAVKRF WMPRLIEKME QTISTTTSSF ISSPSSSSSI 180 STMEKQQSPP INSLPSPHPT HQTYLPSSPT LQEPPKTDNS ENENLNICST DSFQLHHDDD 240 CYHVEIMGNS CYGGEEAFGH PAMSAFESRD ISMLECQLAA PDDWFSNDVA DSLWNIDESW 300 QYRKLEDFGD LS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 6e-91 | MYB family protein |