PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159915.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 112aa MW: 12567.9 Da PI: 4.8671 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 35.7 | 2.8e-11 | 48 | 110 | 1 | 67 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 ++Yn+YA +vGF vr+ k+++++ ++++ ++ f Csk g++++++k ++ rtgC a ++ XP_019159915.1 48 DMYNDYAFRVGFCVRRGKQRYNSATKTMETKMFHCSKDGFKRSTRKG----CYSKIDGRTGCGAFVQ 110 58****************************************98877....8899999****99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence |
MYDSIAQQDV AETEHTTDPV GVVDTEDANP ADQDLVGMSV CSVDEAYDMY NDYAFRVGFC 60 VRRGKQRYNS ATKTMETKMF HCSKDGFKRS TRKGCYSKID GRTGCGAFVQ FD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 2e-12 | FAR1 family protein |