PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23373 Da PI: 9.1827 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 23 | 73 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp++ ++r++lg+f taeeAa a++ a+++++g XP_019159476.1 23 PRYRGVRKRP-WGRFAAEIRDPVK---KARVWLGTFNTAEEAAHAYDTAARAFHG 73 68********.**********654...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MRHRKTPATP IQQPVANIAA DPPRYRGVRK RPWGRFAAEI RDPVKKARVW LGTFNTAEEA 60 AHAYDTAARA FHGPKAKTNF GFTDRRDNDN NNNHSHSIIP PVALPGETHF QRFPYSRPAS 120 SSLSSTVESS SGPRPPSDRN KQPPPRPKVP VPPLPDDCHS DCDSSSSVVD DQDQTTSSFF 180 PKQPLSFDLN LPPPPLDDFV ADELKVTALH L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 1e-20 | ERF family protein |