PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 314aa MW: 34875.4 Da PI: 7.7338 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.8 | 4.7e-33 | 167 | 224 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYY+Ct+++C+vkk+vers++dp++v++tYeg+Hnh+ XP_019159311.1 167 EDGYRWRKYGQKAVKNSPFPRSYYKCTTQKCTVKKRVERSHQDPTTVITTYEGQHNHH 224 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MSENQFYHDH TRFNPFFGDG DDDHRNPSLY SSNPPHPEFD LASMTSMEYN GNNVLSSSAF 60 PTLLWSSSST RSEVVGPPSS DHHVQECSRK SSSVSVRQPA GSSSSSEAAG GGGGGGEEDS 120 SKSSKNLEYE GGEDKSKKMN KGKKKEEKKQ REPRFAFITK SEIDNLEDGY RWRKYGQKAV 180 KNSPFPRSYY KCTTQKCTVK KRVERSHQDP TTVITTYEGQ HNHHCPATLR GNAAAMLSSP 240 PSFFPSSAPP FPGDLFANQM YPAAPHFPPP IMYNYQQSHG SLIGGQPPPQ PQFDYGLFQE 300 MVASLVHKQE HNNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 4e-47 | WRKY family protein |