PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159024.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 226aa    MW: 24243.9 Da    PI: 9.4899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.35.8e-212575256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  XP_019159024.1 25 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 75
                    6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAVKGREDGG VKGGAGKVNG IKEVHYRGVR KRPWGRYAAE IRDPGKKSRV WLGTFDTAEE  60
AARAYDAAAR EFRGAKAKTN FPSPSENHSP SQSSTVESSG SETGGHAPQF PLELDLTRRL  120
GSGEAAGVRS VNTNNNNTFQ FFHPQPAVAV LPNGQPVLLF ETLWRPGAVS HPLPDQFEPA  180
NPSKRPAFSD SSTFSVVEEN HFVGAGAGVA EKRLNLDLNL APPTEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-22ERF family protein