PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 163aa MW: 17891.8 Da PI: 7.072 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.2 | 0.00027 | 76 | 98 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k+F++ L H +H XP_019159012.1 76 YRCESCRKVFRSYQALGGHRASH 98 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 125 | 147 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H XP_019159012.1 125 HECPFCYRVFSSGQALGGHKRSH 147 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MRSHVWNPYM QRTAAAAAAG DDSETEAVSS VSDYSPEEDG AYCLMMLSRD KWADEESSQP 60 AGSGEVKTTA NGKKKYRCES CRKVFRSYQA LGGHRASHKK IIKRCDDDEN VLVGENNGDV 120 EEKLHECPFC YRVFSSGQAL GGHKRSHFTA ASASTCLLSP STK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 6e-36 | C2H2 family protein |