PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159009.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 279aa    MW: 31108.3 Da    PI: 6.4297
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.9e-16138188255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg++  a +Aa a+++a+ k++g
  XP_019159009.1 138 KYRGVRRRP-WGKFAAEIRDPKRRG--FRIWLGTYEKAADAALAYDRAAYKMRG 188
                     8********.**********96554..9************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNQENLSSSD LSLLESISQH LLYDSNFSDI LLTKSSSHDL IKSLSHDLTD PVDSHDSSFD  60
FFDILSRMNS SHELTDPVDG HDLSFDFSDM LLRTNSSHEW SDTTYSHDSS NISEPGNEVA  120
NEGRAEARGS QAEGDWRKYR GVRRRPWGKF AAEIRDPKRR GFRIWLGTYE KAADAALAYD  180
RAAYKMRGSR AVLNFPHLIG NPDAPEPVRV KPRRRLQSSP EAEAEALPTS PPSSSSSSVE  240
SLQSPKRRKI ELINAVAKAN LMNAISGIQL TRTQSTSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-28ERF family protein