PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25142.7 Da PI: 6.8868 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 79 | 129 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg++ t+e+Aa+a++ a+++++g+ XP_019158972.1 79 SYSGVRKRI-WGKWVSEIREPKK---KSRIWLGTYPTPEMAARAHDVAALAIKGH 129 79****887.**********854...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEEEHAITTP PCSSATSTVP ATSSSASCTS NSANSDGSNS SAAATFPKKS LKRVNNGGKN 60 GDENKKSRKN GGANLEYPSY SGVRKRIWGK WVSEIREPKK KSRIWLGTYP TPEMAARAHD 120 VAALAIKGHS ASLNFPHLAH HLPRPASTSP KDIQAAAARA AATTFPSTDA GEDGAQPRAA 180 DNTQQHLLTT NVVDDDIVFD LPDLSLVSGM DDEYGQISPS PLAGNNAGFQ LDEPFLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-43 | ERF family protein |