PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 129aa MW: 14380 Da PI: 4.9865 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 155.7 | 7.9e-49 | 4 | 98 | 3 | 97 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +qd++lPianv+rimkk+lP akisk+ ke +qec+sefisfvt+easdkc++e+rkt+ngdd++wal+++Gf+ y+e+++ yl+k+re e+++ XP_019158595.1 4 QQDKLLPIANVGRIMKKILPPTAKISKEGKERMQECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSIGFDVYAEAMTRYLHKFREYERQR 98 79******************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MDDQQDKLLP IANVGRIMKK ILPPTAKISK EGKERMQECA SEFISFVTGE ASDKCHKENR 60 KTVNGDDICW ALSSIGFDVY AEAMTRYLHK FREYERQRAN NQTMGGGAAS NDEDGSPPDN 120 QTAGETAYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 8e-54 | NF-YB family protein |