PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 156aa MW: 17269.3 Da PI: 4.9907 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 46.3 | 1.4e-14 | 72 | 136 | 2 | 68 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 Yn YA++vGFsvrk +++++ +++i +++f C k g++e+ ++ + ++ rtgC a ++ XP_019158339.1 72 LYNGYAYRVGFSVRKGQQRYKASTKSIQMKRFFCAKAGYKEKPNSG--VKVYSKIDIRTGCGALVQF 136 7***************************************999887..899999********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MTYLRRYDEL QLGVANLEGL SQWPIRNEDF VGDSISTDQA DAKIDIDGSS SSPVDEDLVG 60 VVVSNSDEAF ELYNGYAYRV GFSVRKGQQR YKASTKSIQM KRFFCAKAGY KEKPNSGVKV 120 YSKIDIRTGC GALVQFDVLG GGMDVDSYKT CERAQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 8e-10 | FAR1 family protein |