PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019158214.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 279aa    MW: 30678.3 Da    PI: 6.5459
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019158214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-2092142155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p+    r  r +lg++gta eAa a+++a+++++g
  XP_019158214.1  92 CNYRGVRQRT-WGKWVAEIRVPK----RgSRLWLGTYGTAIEAALAYDEAARAMYG 142
                     56*****999.**********83....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MTSDHSTQRD PKMVILDDQA SSNVGSLPLD KRKTRKRKDG PKNVAETLAK WKEYNKKLDF  60
MEGGGKRLRK APAKGSKKGC MKGKGGPENV RCNYRGVRQR TWGKWVAEIR VPKRGSRLWL  120
GTYGTAIEAA LAYDEAARAM YGPCARLNLP NYTKTECSCL PSASASDSTV ASSLSEIETA  180
ASSNIEPLHS DKGDGGKAKT EEPFDLTANL DDFSWDEMFN VDDILGVLNT PLNVPGDTPG  240
SGTRSLEDLS FLNQEREDDS RFDLDGVGFL DFNSELGIW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13239RKTRKRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.24e-32ERF family protein