PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019158197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29636.3 Da PI: 10.1057 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 110.6 | 1.7e-34 | 12 | 129 | 6 | 129 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 rFhP+deel + L +k+ ++++++ +i e+d+ k++Pwd+p ++++e+++w+fFs+rd + rat+sgyWk+tgkd+++++ +++l XP_019158197.1 12 RFHPSDEELS-HILWRKMGDSSFSA-PAIGEADLRKLDPWDFPgVSLQGERRKWFFFSPRDWMNG----IFRATSSGYWKTTGKDTQIFK-GKAL 99 9********8.99*********999.78***************778888889********99864....799******************.99** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 g+k+t+vfy+gr pk +kt+W+mheyrle XP_019158197.1 100 LGMKRTMVFYQGRIPKITKTNWLMHEYRLE 129 ****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDSSKIPPSE RRFHPSDEEL SHILWRKMGD SSFSAPAIGE ADLRKLDPWD FPGVSLQGER 60 RKWFFFSPRD WMNGIFRATS SGYWKTTGKD TQIFKGKALL GMKRTMVFYQ GRIPKITKTN 120 WLMHEYRLES NHEWVICKVF LENKISGISS SNNSEESRPH PMMQTNVVLS TQFLVKLKYK 180 KDTVKFVLNN PTLDGLKAQV LKRFNKLEID GLEFKYRDLH GRMISMVCDE DLKYRLRCLK 240 ACGEIEVRLS LVSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 2e-46 | NAC family protein |