PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157930.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 273aa    MW: 29246.5 Da    PI: 7.6266
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.1e-11156203455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_019157930.1 156 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 203
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDPQAAMMND AVAAGGGDFQ SAATAPFSLS EIWPFAINAA SPYGLGLAAN HHCSSMSDPM  60
FLDQRLNQNG GGGGGGGGAR KRREDDETAK GVSTSGNGLS ESDSKRLKTK GSNENPESKA  120
NGEGTRGKSA EQPVKSAEPP KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP  180
GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS MKLEAVNSRV SPGIEGFQSK DFPPQTFDAS  240
AMAFGSQATR EYPRGTSPDW LHMQIGGGFE RTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
180110RKRREDDETAKGVSTSGNGLSESDSKRLKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-92bHLH family protein