PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157801.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 264aa MW: 29727.3 Da PI: 9.6166

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157801.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	45.1	1.9e-14	93	137	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 i+le +++ +++ AA++L+v++++LKr+CR++GI+ WP k XP_019157801.1 93 GITLEAIEQVLNKTRDVAAQTLNVSPSTLKRACRKFGIPKWPIQK 137 699***************************************877 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MIPWEVLTRI GCGVIMSIVW FKSCRMNHTA VGMLPGLESG CRGRVMQHTP SYECRIPATN 60 DETNFVGLKR IDAISNRSKE KGTTCGRQQK YSGITLEAIE QVLNKTRDVA AQTLNVSPST 120 LKRACRKFGI PKWPIQKRKR GNCPPNPKQA TKKRKGSEQC PAVALPPEQA ATPTLQGNST 180 MSVKVTYKNN TVRFALSSSS TMKYLEEQLE TRFEITLDNF FIKYQDEEDE WITLTCDSDL 240 RYCMDVLSSS GKLVIRMMVT PKSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	155	KRKRGNCPPNPKQATKKRK
2	138	156	KRKRGNCPPNPKQATKKRK
3	147	155	PKQATKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-15	Nin-like family protein