PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157731.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 277aa MW: 32153.8 Da PI: 4.6472

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.5	1.1e-39	19	146	2	128
NAM 2 ppGfrFhPtdeelvveyLkk.kvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppG+rF P d+el+ yL+k k+ + l+ + i+ev++yk+ P +L + ++++e++e+y F++rd+ky++g+r+nra+ +gyWka g dk++ XP_019157731.1 19 PPGVRFCPFDHELI--YLHKlKIMDCILPY-NQIQEVNLYKYSPAELSdMypRTEGEKEELYVFTPRDRKYRNGTRPNRAAGNGYWKAAGADKPI 110 9***********..88762466666777.78**********84356666677899****************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++ ++g kktLv+y+gr pkgekt+W+mhe+++ XP_019157731.1 111 THGDHGVIGYKKTLVYYEGRPPKGEKTNWIMHEFTV 146 9999****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MEPFSSNPLP NNNKTIDFPP GVRFCPFDHE LIYLHKLKIM DCILPYNQIQ EVNLYKYSPA 60 ELSDMYPRTE GEKEELYVFT PRDRKYRNGT RPNRAAGNGY WKAAGADKPI THGDHGVIGY 120 KKTLVYYEGR PPKGEKTNWI MHEFTVKEAK TPKPRRDNAD PMRLDDWVLC RIYKKTDKVA 180 GSTQKEDDDE SNVEANEASP PPPPPQQDEE GEEVQEVQEV RFSVPLNEMT FYDTFEFGND 240 PVYNDAQFIN SDSFIPEIIY NQPLDFHIDH IFDQSFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	3e-49	NAC family protein