PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157726.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 366aa MW: 41277.9 Da PI: 10.1639

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	52.7	8.4e-17	243	289	3	49
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 + i+l+ l++ F ++ AAk+L+v++++LKr+CR++GI+RWP k XP_019157726.1 243 HGITLHLLQQLFGKSRDTAAKTLEVSTSTLKRACRNFGINRWPNHKG 289 569****************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MHHRSLTPLL KIFHLRDWRN KLNGHHILPL PLPRGGCSTM AVSPGTLLVL RRWGPPRILL 60 WLNIGVQEME KVLPVVHTDV NLFWKCKYTT FSSIEVEVGI EQKSVTHPPT SAQYRVYSGA 120 ALHFFKKEFG DTSNSVQLII PLFKLASIGN IGSLVVELEK SVNLERLAAK LAKSHTVYIL 180 PVLLEAKCRM MQLNSLCEGH IPKSSETNEG RNNVVELNNS IDAKDGNTSS HKTHTISRWE 240 KDHGITLHLL QQLFGKSRDT AAKTLEVSTS TLKRACRNFG INRWPNHKGK RLSCSLNQKQ 300 HLQAVKKHKG IQPCPALPPL QPKNSRQYDE DEWITLTCDS ELLHGLDVLR SCGKTVIRMM 360 VTPKSD

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MHHRSLTPLL KIFHLRDWRN KLNGHHILPL PLPRGGCSTM AVSPGTLLVL RRWGPPRILL  60
WLNIGVQEME KVLPVVHTDV NLFWKCKYTT FSSIEVEVGI EQKSVTHPPT SAQYRVYSGA  120
ALHFFKKEFG DTSNSVQLII PLFKLASIGN IGSLVVELEK SVNLERLAAK LAKSHTVYIL  180
PVLLEAKCRM MQLNSLCEGH IPKSSETNEG RNNVVELNNS IDAKDGNTSS HKTHTISRWE  240
KDHGITLHLL QQLFGKSRDT AAKTLEVSTS TLKRACRNFG INRWPNHKGK RLSCSLNQKQ  300
HLQAVKKHKG IQPCPALPPL QPKNSRQYDE DEWITLTCDS ELLHGLDVLR SCGKTVIRMM  360
VTPKSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	7e-10	Nin-like family protein