PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157602.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 830aa MW: 94072.8 Da PI: 6.7399

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.9	2.2e-15	78	152	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 k+Y++YA++ GFs+ + + ++ k +g i++ +f Cs+e +++++ ++ C+a+++++++++++w vtk++++HnH++ XP_019157602.1 78 KYYDAYARHGGFSTHVGQYSRAKPDGPIVSWDFSCSREVFKRKNVES--------------CNAMIRIERKNTENWIVTKFVEDHNHSI 152 69*************************************999877..............************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
MAFEMDGEVI GVKGNQRPKD GEANIERKKD GKRNRETHAE HKDGKQNLLG YSTEEESSNE 60 VEKPFVGMVF ESEEAARKYY DAYARHGGFS THVGQYSRAK PDGPIVSWDF SCSREVFKRK 120 NVESCNAMIR IERKNTENWI VTKFVEDHNH SIVGPSKVHY LRPRRHFAGA SKNVVEIPDS 180 QADAMVSMDG NHVSCNTNQG VHNAVSTKGV PIAMATNQCT QIAANTNQVL QNAFSLEANH 240 ITRTISPVTP VNFIQPCSRR RALGRYAQNL LDYFKKMQAE NPGFYYAIQL DEDNRMTNVF 300 WADARSRVAY SHFGDAVIFD TMYRPNQFQV PIAPFTGVNH HGQMVSFGCA LLFDESESSF 360 TWLFQTWLSA MNNCAPVSIT TDQDRAIKAA INQVLPGTRH CICKWHILRE GQERLTHVYM 420 AYPSFHGELY SCINYSETIE DFESSWTSLL DKFDVHNNEW LQAVYIARQQ WSPVYFRDTF 480 FAVLSSKHGV SSFFDGYVNQ QTALPDFFKQ YERALENSLE REIEADFDTI CTAPMLKTPS 540 PMEQQAANLY TRKVFTKFQE ELVETFVYTA NKIDGDEVLS KFRVAKYEHD DKAFIVELNF 600 AETKASCSCQ MFEYSGILCR HILTVFTVTN VLTVPSHYIL KRWTRNAKSV LGSDEQDAVA 660 RAIDSLASRF NNLCQDALKY AEEGAVAVET YDAASSALRE GSRKIAIMKK HVAKVRPPTA 720 LASGNPNDDS NKKTPSTTSD TGWPWQDVMP YHINLNDVGV PVGDLDQPTM TPVAINRDAS 780 FADNTVVYTC FKSMTWMIES KNPANKVAVI NLKFRCIAAA RLWQESSWRN

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

MAFEMDGEVI GVKGNQRPKD GEANIERKKD GKRNRETHAE HKDGKQNLLG YSTEEESSNE  60
VEKPFVGMVF ESEEAARKYY DAYARHGGFS THVGQYSRAK PDGPIVSWDF SCSREVFKRK  120
NVESCNAMIR IERKNTENWI VTKFVEDHNH SIVGPSKVHY LRPRRHFAGA SKNVVEIPDS  180
QADAMVSMDG NHVSCNTNQG VHNAVSTKGV PIAMATNQCT QIAANTNQVL QNAFSLEANH  240
ITRTISPVTP VNFIQPCSRR RALGRYAQNL LDYFKKMQAE NPGFYYAIQL DEDNRMTNVF  300
WADARSRVAY SHFGDAVIFD TMYRPNQFQV PIAPFTGVNH HGQMVSFGCA LLFDESESSF  360
TWLFQTWLSA MNNCAPVSIT TDQDRAIKAA INQVLPGTRH CICKWHILRE GQERLTHVYM  420
AYPSFHGELY SCINYSETIE DFESSWTSLL DKFDVHNNEW LQAVYIARQQ WSPVYFRDTF  480
FAVLSSKHGV SSFFDGYVNQ QTALPDFFKQ YERALENSLE REIEADFDTI CTAPMLKTPS  540
PMEQQAANLY TRKVFTKFQE ELVETFVYTA NKIDGDEVLS KFRVAKYEHD DKAFIVELNF  600
AETKASCSCQ MFEYSGILCR HILTVFTVTN VLTVPSHYIL KRWTRNAKSV LGSDEQDAVA  660
RAIDSLASRF NNLCQDALKY AEEGAVAVET YDAASSALRE GSRKIAIMKK HVAKVRPPTA  720
LASGNPNDDS NKKTPSTTSD TGWPWQDVMP YHINLNDVGV PVGDLDQPTM TPVAINRDAS  780
FADNTVVYTC FKSMTWMIES KNPANKVAVI NLKFRCIAAA RLWQESSWRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein