PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157601.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 895aa MW: 101178 Da PI: 6.7663

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.8	2.4e-15	74	148	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 k+Y++YA++ GFs+ + + ++ k +g i++ +f Cs+e +++++ ++ C+a+++++++++++w vtk++++HnH++ XP_019157601.1 74 KYYDAYARHGGFSTHVGQYSRAKPDGPIVSWDFSCSREVFKRKNVES--------------CNAMIRIERKNTENWIVTKFVEDHNHSI 148 69*************************************999877..............************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MDGEVIGVKG NQRPKDGEAN IERKKDGKRN RETHAEHKDG KQNLLGYSTE EESSNEVEKP 60 FVGMVFESEE AARKYYDAYA RHGGFSTHVG QYSRAKPDGP IVSWDFSCSR EVFKRKNVES 120 CNAMIRIERK NTENWIVTKF VEDHNHSIVG PSKVHYLRPR RHFAGASKNV VEIPDSQADA 180 MVSMDGNHVS CNTNQGVHNA VSTKGVPIAM ATNQCTQIAA NTNQVLQNAF SLEANHITRT 240 ISPVTPVNFI QPCSRRRALG RYAQNLLDYF KKMQAENPGF YYAIQLDEDN RMTNVFWADA 300 RSRVAYSHFG DAVIFDTMYR PNQFQVPIAP FTGVNHHGQM VSFGCALLFD ESESSFTWLF 360 QTWLSAMNNC APVSITTDQD RAIKAAINQV LPGTRHCICK WHILREGQER LTHVYMAYPS 420 FHGELYSCIN YSETIEDFES SWTSLLDKFD VHNNEWLQAV YIARQQWSPV YFRDTFFAVL 480 SSKHGVSSFF DGYVNQQTAL PDFFKQYERA LENSLEREIE ADFDTICTAP MLKTPSPMEQ 540 QAANLYTRKV FTKFQEELVE TFVYTANKID GDEVLSKFRV AKYEHDDKAF IVELNFAETK 600 ASCSCQMFEY SGILCRHILT VFTVTNVLTV PSHYILKRWT RNAKSVLGSD EQDAVARAID 660 SLASRFNNLC QDALKYAEEG AVAVETYDAA SSALREGSRK IAIMKKHVAK VRPPTALASG 720 NPNDDSNKKT PSTTSDTGWP WQDVMPYHIN LNDVGVPVGD LDQPTMTPVA INRDASFADN 780 TVVYTCFKSM TWMIESKNPA NKVAVINLKL QDYGKSPAGE TEVQFRLTRV TLEPMLKSMA 840 YISQQLSMPA NRVAVINLKL QDTKTTSGET EVKFQVSRDA LGSMLRSMAY IHEQL

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MDGEVIGVKG NQRPKDGEAN IERKKDGKRN RETHAEHKDG KQNLLGYSTE EESSNEVEKP  60
FVGMVFESEE AARKYYDAYA RHGGFSTHVG QYSRAKPDGP IVSWDFSCSR EVFKRKNVES  120
CNAMIRIERK NTENWIVTKF VEDHNHSIVG PSKVHYLRPR RHFAGASKNV VEIPDSQADA  180
MVSMDGNHVS CNTNQGVHNA VSTKGVPIAM ATNQCTQIAA NTNQVLQNAF SLEANHITRT  240
ISPVTPVNFI QPCSRRRALG RYAQNLLDYF KKMQAENPGF YYAIQLDEDN RMTNVFWADA  300
RSRVAYSHFG DAVIFDTMYR PNQFQVPIAP FTGVNHHGQM VSFGCALLFD ESESSFTWLF  360
QTWLSAMNNC APVSITTDQD RAIKAAINQV LPGTRHCICK WHILREGQER LTHVYMAYPS  420
FHGELYSCIN YSETIEDFES SWTSLLDKFD VHNNEWLQAV YIARQQWSPV YFRDTFFAVL  480
SSKHGVSSFF DGYVNQQTAL PDFFKQYERA LENSLEREIE ADFDTICTAP MLKTPSPMEQ  540
QAANLYTRKV FTKFQEELVE TFVYTANKID GDEVLSKFRV AKYEHDDKAF IVELNFAETK  600
ASCSCQMFEY SGILCRHILT VFTVTNVLTV PSHYILKRWT RNAKSVLGSD EQDAVARAID  660
SLASRFNNLC QDALKYAEEG AVAVETYDAA SSALREGSRK IAIMKKHVAK VRPPTALASG  720
NPNDDSNKKT PSTTSDTGWP WQDVMPYHIN LNDVGVPVGD LDQPTMTPVA INRDASFADN  780
TVVYTCFKSM TWMIESKNPA NKVAVINLKL QDYGKSPAGE TEVQFRLTRV TLEPMLKSMA  840
YISQQLSMPA NRVAVINLKL QDTKTTSGET EVKFQVSRDA LGSMLRSMAY IHEQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein