PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157541.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 351aa    MW: 39537.2 Da    PI: 4.5513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-1784135155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++++grW+A+I  ++    +k+ +lg++gt eeAa+a++ a+ +++g
  XP_019157541.1  84 SKYRGVARHHQNGRWEARIGLVYG---SKYLYLGTYGTQEEAAAAYDMAAIEFKG 135
                     89*******************543...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MKLTYGTRIL GMAIRARRES KFIWGHMIVK RLLQEPMILL LLSTGDLKPQ LIFRKELEEM  60
QKLSREEFLA SLRRQSSGFS RGVSKYRGVA RHHQNGRWEA RIGLVYGSKY LYLGTYGTQE  120
EAAAAYDMAA IEFKGPGAVT NFDISNYGDK LKEIRERGQT RRNLANNAES SAEVQSGDQR  180
DPNQEIEDGD EMQQNERVEG HSVTFDEEIQ PDELLLDPYP KNVESLQPEI LKLEDPGKEH  240
DEHPWNLCMG VGFEAFPVSN IDLEVKPPSL DFFNDSSFDD EIDLVFGKRV RGSDEFKQDD  300
VFGSMLMDDE FEAKAVVKGQ EVTASDYSSS VSTSVSVSSE VGGLASSNLL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.22e-46ERF family protein