PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157467.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 253aa    MW: 28742.9 Da    PI: 9.1411
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.48.1e-07701095190
            FAR1  51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     + r+r+++r++C+a++ ++k+k   + v+ ++l+H+H ++
  XP_019157467.1  70 QCRRRVSNRVNCNARICITKDKGVGFIVSIFVLKHTHRMC 109
                     568999********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGGYTSIPVK YWWPAVDSEI IPAISYRFKT LAEGGVFLYQ QRQDIREGVK GGGRSPPKPV  60
EGANGGSITQ CRRRVSNRVN CNARICITKD KGVGFIVSIF VLKHTHRMCS EPLKLFMRIN  120
RKLDVAQQAF LTNCVKANVG GSKGFRLYQE SVGSYANIGA TDTEFHNLKR DLQSYVHDKD  180
GEMIIAKFKQ KRDICENFFF DYYLDEENHL ACLFWADHTG RQSFLSFGDV ISFDATYGTN  240
RYGNVYPFIV LIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.16e-13FAR1 family protein