PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157207.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 771aa MW: 86763.1 Da PI: 8.4118

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.9	2.6e-21	182	280	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fY+ Y+ GF+vr s+ k+ r+g +++ +vCs++g + +k ++k+rr+r+++r+gC+akl +kk+++g+++v+k++++H XP_019157207.1 182 EFYKIYGGASGFDVRHSSVKRD-RSGDVIRCSLVCSRQGAKGGGGRKptldvrgtssSNKQRRRRVSNRVGCNAKLGLKKKSTGEFVVSKFVEDH 275 6**************99998.7777**********99999999***9999******************************* PP FAR1 86 nHela 90 nH+l+ XP_019157207.1 276 NHSLC 280 **8 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MAMGPEGCVQ ESALHLFVYC AKVAQLWHKL GWPQISYFAG WVLRDDNGVF LAAKNEDPGL 60 YMAKEAEALS IREALSCFGF LIEDIKVLAS EIVDVEFYCV KRSANSAAHI VARRPFLCQN 120 PGVKVGCDYY RSIDGDFGTR DATHYTPGKT NTPQPTLETQ RGHYNHTCTR AVFLNQYTKG 180 FEFYKIYGGA SGFDVRHSSV KRDRSGDVIR CSLVCSRQGA KGGGGRKPTL DVRGTSSSNK 240 QRRRRVSNRV GCNAKLGLKK KSTGEFVVSK FVEDHNHSLC SEGFRLCREV AGSFENVGAT 300 YVEFHNFKRD LQTYVDVADG EMIIERFKTK REACDSFFFD YHLDEENRIA RLFWADPIGR 360 RSFSCYGDVI SFDATCSTNR YNLVFVPFTG VDNHKRCITF AADPAMKIAM EQVLPGCRHR 420 FCMWHIMTKL LMEKYNLSDH RWFKKLYAER DHWIPAFFSD LPMSGLVRTT SRSEAQNSVY 480 GKFTRLHSSL VEFYMQTESV LDTQRHNQAK LDAQCEGSLP EFKTPLALER HAADLFTLTI 540 FYALQKEIEA ACFYCEVVGI HEDGGTIYYN IGGDCTTTHT VQYEPSGCIA FCSCKMFQRL 600 GLICRHMFLV FKSAHIEQLP SQYIVERWRK HLGCGACRGR RSDGDPPKSG ASELWSEIQT 660 CVGMVGESMV CQARMVEVLK ELRDEFASDG TIICEAKGNR AAIEALCGVQ PPPCITIKPP 720 AQAKNKGSGK RIKSTREIAI ENSGKAGRKC GVCGEYARHN ARSCPSKQRA L

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MAMGPEGCVQ ESALHLFVYC AKVAQLWHKL GWPQISYFAG WVLRDDNGVF LAAKNEDPGL  60
YMAKEAEALS IREALSCFGF LIEDIKVLAS EIVDVEFYCV KRSANSAAHI VARRPFLCQN  120
PGVKVGCDYY RSIDGDFGTR DATHYTPGKT NTPQPTLETQ RGHYNHTCTR AVFLNQYTKG  180
FEFYKIYGGA SGFDVRHSSV KRDRSGDVIR CSLVCSRQGA KGGGGRKPTL DVRGTSSSNK  240
QRRRRVSNRV GCNAKLGLKK KSTGEFVVSK FVEDHNHSLC SEGFRLCREV AGSFENVGAT  300
YVEFHNFKRD LQTYVDVADG EMIIERFKTK REACDSFFFD YHLDEENRIA RLFWADPIGR  360
RSFSCYGDVI SFDATCSTNR YNLVFVPFTG VDNHKRCITF AADPAMKIAM EQVLPGCRHR  420
FCMWHIMTKL LMEKYNLSDH RWFKKLYAER DHWIPAFFSD LPMSGLVRTT SRSEAQNSVY  480
GKFTRLHSSL VEFYMQTESV LDTQRHNQAK LDAQCEGSLP EFKTPLALER HAADLFTLTI  540
FYALQKEIEA ACFYCEVVGI HEDGGTIYYN IGGDCTTTHT VQYEPSGCIA FCSCKMFQRL  600
GLICRHMFLV FKSAHIEQLP SQYIVERWRK HLGCGACRGR RSDGDPPKSG ASELWSEIQT  660
CVGMVGESMV CQARMVEVLK ELRDEFASDG TIICEAKGNR AAIEALCGVQ PPPCITIKPP  720
AQAKNKGSGK RIKSTREIAI ENSGKAGRKC GVCGEYARHN ARSCPSKQRA L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-62	FAR1 family protein