PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019157196.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 430aa MW: 46210.3 Da PI: 5.8785

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019157196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.8	1.5e-10	242	283	14	58
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 Re+ArrsR+RK+ + Le+ v +L+ eN++L +++++ ++k XP_019157196.1 242 RESARRSRRRKQVHLTDLETQVSQLKVENSSLL---KRWTEVSQK 283 9****************************9998...555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDKVLTVGEN VDKFMPPPLP LPPDKMMMSR SPSEYAFQRF LQEATASVDH TLSSSPPASC 60 SSTSAPAASG RQRLPQNDVV EISDRNLGAD RDVNFGHESS GAESATETAK TTSLGAGPAA 120 NVPIGSEDYQ TFLKSRLYLA CAAVAFSRGN CMDPQDSATM LPDKGLEASI SNPGSVVPPK 180 GSGNDFPKGD AEGPAGTSTL PAVQKKSSAR AQSASGSEPS DDDEAEGEAE TTHRTDAKRV 240 RRESARRSRR RKQVHLTDLE TQVSQLKVEN SSLLKRWTEV SQKHNDAAVD NRILKADVET 300 LRAKVKMAEE TVKRITGMHS LFQTMPEIPT LSIPSFVDSH SDTSADATVP LQEDADNHYY 360 QSLCHDSSIQ NGLLDIPPVD NARQDSAATA GVNNIGGMAS MLRVASLENL QNRIRREAGG 420 SCRTQCRISK

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDKVLTVGEN VDKFMPPPLP LPPDKMMMSR SPSEYAFQRF LQEATASVDH TLSSSPPASC  60
SSTSAPAASG RQRLPQNDVV EISDRNLGAD RDVNFGHESS GAESATETAK TTSLGAGPAA  120
NVPIGSEDYQ TFLKSRLYLA CAAVAFSRGN CMDPQDSATM LPDKGLEASI SNPGSVVPPK  180
GSGNDFPKGD AEGPAGTSTL PAVQKKSSAR AQSASGSEPS DDDEAEGEAE TTHRTDAKRV  240
RRESARRSRR RKQVHLTDLE TQVSQLKVEN SSLLKRWTEV SQKHNDAAVD NRILKADVET  300
LRAKVKMAEE TVKRITGMHS LFQTMPEIPT LSIPSFVDSH SDTSADATVP LQEDADNHYY  360
QSLCHDSSIQ NGLLDIPPVD NARQDSAATA GVNNIGGMAS MLRVASLENL QNRIRREAGG  420
SCRTQCRISK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	253	RRSRRRKQ
2	248	253	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-43	bZIP family protein