PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019157172.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 215aa MW: 24760.1 Da PI: 6.2929 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.5 | 1.5e-20 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t+eql++Le+ Fe++ +++ e++ +LAk+lgL rq+ vWFqNrRa++k XP_019157172.1 65 KKKRLTTEQLDALEKSFEEEIKLDPERKMRLAKELGLHPRQIAVWFQNRRARWK 118 56679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119.6 | 1.7e-38 | 65 | 154 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kk+rl++eq+ +LE+sFeee kL+perK++la+eLgl+prq+avWFqnrRAR+k+kqlE+ +++Lk+++d +++e+++Le+ev +Lr+ + XP_019157172.1 65 KKKRLTTEQLDALEKSFEEEIKLDPERKMRLAKELGLHPRQIAVWFQNRRARWKAKQLERLCDSLKHQFDLVSREKQKLEEEVVALRSIV 154 9*************************************************************************************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MEWNNNHLTR PFVPPSDAAS FSFLYTYNYD QFPAGIDMMK SSSSSSVQVG EGAQFMGGVV 60 EKNDKKKRLT TEQLDALEKS FEEEIKLDPE RKMRLAKELG LHPRQIAVWF QNRRARWKAK 120 QLERLCDSLK HQFDLVSREK QKLEEEVVAL RSIVRDEARK KQVSTTEILS GEETVESTSI 180 PSCNVVYNNM FNVVVDDCTT LMPPPYWSTL PSTYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-49 | HD-ZIP family protein |