PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019157016.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HD-ZIP
Protein Properties Length: 330aa    MW: 36782 Da    PI: 6.839
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019157016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.91.5e-17101154356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa+ k
  XP_019157016.1 101 KKRRLSLEQVKALEKSFEVGNKLEPERKMQLARALGLQPRQIAIWFQNRRARSK 154
                     4558999*********************************************99 PP
2HD-ZIP_I/II128.92.1e-41100192193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls eqvk+LE+sFe  +kLeperK++lar+Lglqprq+a+WFqnrRAR ktkqlEkdy+ Lkr+++al+++n++L++++++L++el++
  XP_019157016.1 100 EKKRRLSLEQVKALEKSFEVGNKLEPERKMQLARALGLQPRQIAIWFQNRRARSKTKQLEKDYDLLKRQFEALSADNDALKSQNKKLHSELMA 192
                     69**************************************************************************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MMNMISGNGI MAAAFVPPLP PAPETSITFQ NPEETQYLSH HHHHDFNGGG NNVSSLLMMR  60
RSVSFTGGME RPWENQNHQE LLRGGDDDTT SDDGCSQLGE KKRRLSLEQV KALEKSFEVG  120
NKLEPERKMQ LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDLLKRQFE ALSADNDALK  180
SQNKKLHSEL MALRNRESKG SGPPSSTTMI INLNKETVEG SWNNNNNNVS ENNSIIDVNL  240
GSATTTADSP LYSNKHHHHH VLPPPPSSIS QTNLHHHLLH PSSCNNKVSD QSPVQDEGYC  300
NMFGAAMDEQ AEFLAMAPAS TTFPLSFSFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARSKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-54HD-ZIP family protein