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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019156799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 242aa MW: 25586.7 Da PI: 8.8766 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0013 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F + L H +H XP_019156799.1 96 YKCSVCDKAFGSYQALGGHKASH 118 9*********9999998888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MALEALNSPT TPRASVFQFE DPASLSYLDQ QWAKGKRSKR PRSVERQPTE EEYLALCLIM 60 LARSGGGSSA KAVEAPAAAP RPPPPPQVSE QNKLLYKCSV CDKAFGSYQA LGGHKASHRK 120 LGGGDDHPTT STATNSSAGA GAGRTHECSI CHKCFPTGQA LGGHKRCHYE GTIGNGGGNS 180 AAAGTSSSGT GSSNSLRNFD LNLPALPELS PVFLRRFADD EVESPHPAKK SRLQIPTKLE 240 LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 1e-56 | C2H2 family protein |