PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156757.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 344aa    MW: 36424.4 Da    PI: 8.1915
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.52.4e-31113167358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      +rY+eClkNhA+s+Gg ++DGCgEfmp  geegt+a+lkCaAC+CHR+FHR+e++
  XP_019156757.1 113 VIRYRECLKNHAVSIGGSVTDGCGEFMPG-GEEGTVASLKCAACNCHRSFHRQETT 167
                     589*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MNPPHPFSTS PRHSSSSSQE DDDDLIAIIQ SQQQALLSTY AHNNAAMAYC LEIMCTQANP  60
SHGGSTLGHR VIHRETSRMA LTGEGEQIGG GIQGGVDDAP PRKQENSVAG PRVIRYRECL  120
KNHAVSIGGS VTDGCGEFMP GGEEGTVASL KCAACNCHRS FHRQETTHGS GGGGAPPTNP  180
PALPSFASMT HRHNAWASLA AQSPKTPAFG GAAPPTPSAA AAATAAAVDS SFQEPNFSPH  240
KCFPSPASTA AATVAETRGK KRFRTKFTAE QKEKMSEFAD KIGWRIPREE ENIHGVERFC  300
GEIGVKRQVF KVWMHNNKSS AKPNAATSHP PLTTTSSSSS SINN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-25ZF-HD family protein