PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019156711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 348aa MW: 37570.6 Da PI: 10.2105 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 64.3 | 2.4e-20 | 14 | 59 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEdell ++v+++G+++W++I++ ++ gR++k+c++rw + XP_019156711.1 14 RGPWSPEEDELLQRLVEKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 59 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.6 | 3e-18 | 68 | 110 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++v+a++++G++ W+tIar + gRt++ +k++w++ XP_019156711.1 68 AFTAEEDEKIVRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 110 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MATMSQKKDA DRIRGPWSPE EDELLQRLVE KHGPRNWSLI SKSIPGRSGK SCRLRWCNQL 60 SPQVEHRAFT AEEDEKIVRA HAKFGNKWAT IARLLSGRTD NAIKNHWNST LKRKSAAAAV 120 SEDSSGFEPR RKRSSSVGAA GVNVSGSGSV SGFYVSPGSP SGSDLSDSSL PHLYRPIART 180 GGVFPVTQIE TASSPAANDP PTSLTLSLPG SDTSETPSPT SVTPTSQLVH SPHAPHAPPP 240 PPPPPPLPRT PISFTPVVAP PQPPPPPPPP PLPSLPPQTH QNFEFLPTPP PQMAEKPLFS 300 PEFLAVLQDM IRKEVRTYMS GVDKNGLCMP TEAIRNAVVK RISLSRIE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 133 | KRKSAAAAVSEDSSGFEPRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-71 | MYB family protein |