PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019156230.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 395aa MW: 43335.8 Da PI: 9.1318

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019156230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	202.9	9.7e-63	103	231	1	130
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 g+++rkp+w+ErEnn+rRERrRRa+aakiy+GLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyr+g +p+ +e++g+s++++p ss + XP_019156230.1 103 GSGRRKPSWRERENNRRRERRRRAMAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWIVEPDGTTYRNGGRPT-PMEIGGTSTNITPGSSRN 196 6899**********************************************************************.************** PP DUF822 96 sslkssalaspvesysaspksssfpspssldsisl 130 s+ ss++asp++sy++sp sss psp++ d + + XP_019156230.1 197 PSPPSSYFASPIPSYQPSPLSSSCPSPTHGDANVS 231 ***************************999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MTKTEIFLFV KSRLSFSILS VSDSLQSSFL SLSLSLSLSL YIYIYIYIYS HRQRLRERVL 60 ERERERELDR VEMMWEPGGS AGSLSEAGGG AGGGETGAGG GSGSGRRKPS WRERENNRRR 120 ERRRRAMAAK IYTGLRAQGN YNLPKHCDNN EVLKALCAEA GWIVEPDGTT YRNGGRPTPM 180 EIGGTSTNIT PGSSRNPSPP SSYFASPIPS YQPSPLSSSC PSPTHGDANV SPYPFAFLRN 240 SLPPLRISNS APVTPPLSSP TRVHKPTFNL ENLTKESMSA LNIPLFASCP TSPTRGHRFP 300 ATIPECDESE TSTVDSEQWM SLQKCGPNAV PTSPTFNLVK PVAQRIPPNS MMFDKGKSID 360 FGFENVAMKA WEGERAHEVG LDDLELKLGN GSTRI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MTKTEIFLFV KSRLSFSILS VSDSLQSSFL SLSLSLSLSL YIYIYIYIYS HRQRLRERVL  60
ERERERELDR VEMMWEPGGS AGSLSEAGGG AGGGETGAGG GSGSGRRKPS WRERENNRRR  120
ERRRRAMAAK IYTGLRAQGN YNLPKHCDNN EVLKALCAEA GWIVEPDGTT YRNGGRPTPM  180
EIGGTSTNIT PGSSRNPSPP SSYFASPIPS YQPSPLSSSC PSPTHGDANV SPYPFAFLRN  240
SLPPLRISNS APVTPPLSSP TRVHKPTFNL ENLTKESMSA LNIPLFASCP TSPTRGHRFP  300
ATIPECDESE TSTVDSEQWM SLQKCGPNAV PTSPTFNLVK PVAQRIPPNS MMFDKGKSID  360
FGFENVAMKA WEGERAHEVG LDDLELKLGN GSTRI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	125	RRKPSWRERENNRRRERRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	2e-92	BES1 family protein