PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156062.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 232aa    MW: 25258.7 Da    PI: 6.9761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08149189954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_019156062.1 149 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 189
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDIELLKSAS SEADQMEMML MMQMDKLPGD FSGAGDDYSD VNNVQVMDFT SQGIIDTTFM  60
NVASFAGGSP PAAYQEPGFP ADSVGRLRGA GGGSGYPPQK GTTTTSMAAM REMIFRIAAM  120
QPIHIDPEAV KPPKRRNVKI STDPQSVAAR HRRERISEKI RILQRLVPGG TKMDTASMLD  180
EAIHYVKFLK NQVQSLERAG ASRRPTGIEF PVPISTTSTY LPTSGTQHYG DP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.13e-48bHLH family protein