PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156059.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 260aa    MW: 27734.8 Da    PI: 8.333
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.0001378100123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C + F++   L  H+++H
  XP_019156059.1  78 YTCTFCRREFRSAQALGGHMNVH 100
                     9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MAAQLGLVSV SQLQNLVESQ QHYLPQPPPP SGAGATTGYW MRNTKNMAAA AAEDEDSWEI  60
RAFAEDTGNN ATWPPRSYTC TFCRREFRSA QALGGHMNVH RRDRARLHQA PRPNVPHFPS  120
PAAVANSAVL FPAQEIVANA SLCLLYSLPN PNAAAAFSPA AVKPCNVNSS PTLLSISPFA  180
TSNNLPSLNF PATTQFIAAS SLKVPAESSQ AASNSNSSNN NKNYSNGTRK REAAIEEQLE  240
VDLELRLGRG SSSSSSSSPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.16e-27C2H2 family protein