PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019156037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 26120.6 Da PI: 6.7688 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.5e-18 | 65 | 115 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+e+r+p + kr+++g++ t+e+Aa+a++ a+++l+g XP_019156037.1 65 PVYRGVRRRG-NGKWVCELREPI----NqKRIWVGSYPTPEMAARAHDVAALALRG 115 68*****999.8*********72....45*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MNESACSSVG FRFRESGQLP PATSSVSGGS CSSSNCMAAH SDEDVLARKP KRPAGRKKFK 60 ETRHPVYRGV RRRGNGKWVC ELREPINQKR IWVGSYPTPE MAARAHDVAA LALRGQFATL 120 NFADSVWRLP VPVSKDAKDI RRAAVMAAEG FRETTTTTAV AKVVEEEVES KLMRIDVSNI 180 DEEEMGVDGM IEKMAEAVLY SPACMQLGNI NAFTTWDQAD QLGSDDVVEV SLWSYSI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 52 | 60 | RPAGRKKFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G63030.2 | 4e-37 | ERF family protein |