PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019156026.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 282aa    MW: 30805.4 Da    PI: 5.9225
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019156026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1192.8e-37251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+e+g++f+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++sF++g+k+ll++
  XP_019156026.1  25 FLTKTYQLVDDPDVDNLISWNEDGTAFIVWKPAEFATELLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDSFRRGEKRLLRD 110
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_019156026.1 111 IQRRKM 116
                     ****86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGPSPVEQSG ETTAGESQRS IPTPFLTKTY QLVDDPDVDN LISWNEDGTA FIVWKPAEFA  60
TELLPKYFKH NNFSSFVRQL NTYGFRKVVP DRWEFANDSF RRGEKRLLRD IQRRKMSAAA  120
NSTPILPNAQ VVTLAVASAL KAVSPTNSAD EQVLSSNSSP AATATAVVLR PTTYTTTPEI  180
LEENDRLRKE NAQLTQELNR LRGLCKNVCN LMSNYAVETP TGSPEGQVLD LLPGRQDSEE  240
RECSGAEAEG GHGVTTTTLS PRLFGVSIGA KRSSASRLAP SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.12e-89HSF family protein