PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155932.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

BES1

Protein Properties

Length: 598aa MW: 67617.7 Da PI: 8.1525

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	95.4	1.2e-29	13	137	14	137
DUF822 14 nnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspve 108 k+ ER RRa +a++ aGLR++Gn++lp ra++n+V++AL+reAG++ve+DGttyr + + a a + p slk++++++ +e XP_019155932.1 13 SRKLLERNRRAFTARMMAGLRHYGNFNLPRRAEMNKVVAALAREAGFTVEPDGTTYRSAPSSNVVAYPARVVGNPLPAG----SLKNCSTSASIE 103 56889****************************************************5555543333333333344444....444555444443 PP DUF822 109 sysaspksssfpspssldsislasa.......asll 137 +++++ ++++sp+s+ds+ + ++ +s++ XP_019155932.1 104 --ASVLRIDESLSPASFDSVVVPDTgakadkyTSSS 137 ..4566677777777777777766554443343444 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MTGNAASSTA KKSRKLLERN RRAFTARMMA GLRHYGNFNL PRRAEMNKVV AALAREAGFT 60 VEPDGTTYRS APSSNVVAYP ARVVGNPLPA GSLKNCSTSA SIEASVLRID ESLSPASFDS 120 VVVPDTGAKA DKYTSSSPMN SSGCLEADQL MQEVHRWEHE SVFLGTPYVP VYVMLSSGII 180 NNSCQLVDPS GVKHELQLLK SLNIDGVVVN CWWGIVEGRE DQKYKWSRYR ELFNIIRDMG 240 LKLLVVMAFN AYGGNEFNVD ICLPQWVLKI GKHSPEIFFT DRVGRCNTEC LSWGIDKKRI 300 LEHRTGREVC YEFMRSFRAE FNDLFTEGLI SAVEVGLGAS GELKYPSFSE RNGWRFPGIG 360 EFQCYDKFLL SRLKNAAKKR GQPSWAMGPE NVGCYNSRPH QTRFFREQGD YDSYYGRFFL 420 QWYTQALIDH ADIILSAATK AFDETPLVVK IPGIHWWYLT SSHAAELTAG YYNTSNRDGY 480 SPLFEVLKKH NATMKLVSKE TQISPGDLVE AYADPIGLCW QVLNGAWDKG VAIAGHNAPR 540 GYDRETFMRL VETSKPRNDP ERHHFTFFVL ERPWQQRVQT TENISELEYF VKCMHGYA

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MTGNAASSTA KKSRKLLERN RRAFTARMMA GLRHYGNFNL PRRAEMNKVV AALAREAGFT  60
VEPDGTTYRS APSSNVVAYP ARVVGNPLPA GSLKNCSTSA SIEASVLRID ESLSPASFDS  120
VVVPDTGAKA DKYTSSSPMN SSGCLEADQL MQEVHRWEHE SVFLGTPYVP VYVMLSSGII  180
NNSCQLVDPS GVKHELQLLK SLNIDGVVVN CWWGIVEGRE DQKYKWSRYR ELFNIIRDMG  240
LKLLVVMAFN AYGGNEFNVD ICLPQWVLKI GKHSPEIFFT DRVGRCNTEC LSWGIDKKRI  300
LEHRTGREVC YEFMRSFRAE FNDLFTEGLI SAVEVGLGAS GELKYPSFSE RNGWRFPGIG  360
EFQCYDKFLL SRLKNAAKKR GQPSWAMGPE NVGCYNSRPH QTRFFREQGD YDSYYGRFFL  420
QWYTQALIDH ADIILSAATK AFDETPLVVK IPGIHWWYLT SSHAAELTAG YYNTSNRDGY  480
SPLFEVLKKH NATMKLVSKE TQISPGDLVE AYADPIGLCW QVLNGAWDKG VAIAGHNAPR  540
GYDRETFMRL VETSKPRNDP ERHHFTFFVL ERPWQQRVQT TENISELEYF VKCMHGYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein