PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019155605.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 352aa MW: 39381.9 Da PI: 7.25

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019155605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.5	2.5e-53	9	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLk+kv+ +k+el +vi+e+d++k+ePwdL++++k +++wyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_019155605.1 9 VPPGFRFHPTDEELLHYYLKRKVSYQKFEL-DVIREIDLNKIEPWDLQERCKIgstPQNDWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 102 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +++g++ktLvfy+grap+g+ktdW+mheyrl XP_019155605.1 103 RN-SFQKIGMRKTLVFYRGRAPHGQKTDWIMHEYRL 137 9.8899**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MASSSNGGVP PGFRFHPTDE ELLHYYLKRK VSYQKFELDV IREIDLNKIE PWDLQERCKI 60 GSTPQNDWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSFQKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLDDA DDPQANPNED GWVVCRVFKK KNLFKVGSES GSAISDQLNT 180 TAANQSRAAV GGFSLRDTAP YLLQPPHGHG GGGFNYSHHI PLPHHYHQLE PQNFIPAATH 240 FSDQHAAAAA PIMVKQLMSD PTRDCESGSD QNLCYQPATA ACDSGLEVGS CEPPPPQSMS 300 EWGMLVSSQM GQDDHGSSKA TRVGFEDANG SAMNHINPLS LRSEMDFWGY GK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MASSSNGGVP PGFRFHPTDE ELLHYYLKRK VSYQKFELDV IREIDLNKIE PWDLQERCKI  60
GSTPQNDWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSFQKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLDDA DDPQANPNED GWVVCRVFKK KNLFKVGSES GSAISDQLNT  180
TAANQSRAAV GGFSLRDTAP YLLQPPHGHG GGGFNYSHHI PLPHHYHQLE PQNFIPAATH  240
FSDQHAAAAA PIMVKQLMSD PTRDCESGSD QNLCYQPATA ACDSGLEVGS CEPPPPQSMS  300
EWGMLVSSQM GQDDHGSSKA TRVGFEDANG SAMNHINPLS LRSEMDFWGY GK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-140	NAC family protein