PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019155581.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YC
Protein Properties Length: 280aa    MW: 31185.3 Da    PI: 4.708
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019155581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC60.82.8e-196861898
           NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                    ++++P arikki+++ded+ +i+  +P l+ska elf+ +l  r++  + +   +tl+   ++++v+  ++fdfl d+v r
  XP_019155581.1  6 DTRFPAARIKKIMQTDEDIGKIANAVPLLVSKALELFLQDLCDRTYDITLKRGAKTLNSYHLKQCVQTCNVFDFLKDVVSR 86
                    5789**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MKKKLDTRFP AARIKKIMQT DEDIGKIANA VPLLVSKALE LFLQDLCDRT YDITLKRGAK  60
TLNSYHLKQC VQTCNVFDFL KDVVSRVPDL GVSDGDDRSA AKRRKIAEAD DHYSDDDIKR  120
SDMLQHETTP SSSSGRGRGR GRGRGRGRGR AVDREQTTLY EKFEDAADQR DEKQKKRNSE  180
RLDSGSETAD SKISLAGQSL EATVRNFDLN VDLNDETGDS SAVPAEAPSP SPTVPSVETK  240
HEEEYPGWSD VEGMAIDPIQ LANLNRTTTD EVEEDYDEEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136145RGRGRGRGRG
2136146RGRGRGRGRGR
3138147RGRGRGRGRG
4138148RGRGRGRGRGR
5140149RGRGRGRGRG
6140150RGRGRGRGRGR
7142151RGRGRGRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19490.12e-59NF-YC family protein